Welcome
This site hosts several projects around standardization in Systems Biology:
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The SED-ML Web Tools provide an easy way to create, edit, execute or validate SED-ML documents. It provides a wizard that creates SED-ML documents from SBML models. All functionality is implemented using LibSEDML a set of .NET libraries for handling SED-ML documents. A standalone version is available with the SED-ML Script Editor as available from the libSedML download page. Project: SED-ML Web Tools |
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The layout application renders SBML models with Layout / Render information. Additionally it supports SBGN-ML files. Have a look! Project: Layout |
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The RenderComparison project displays how different applications render the SBGN markup langauge that is developed as part of the libSBGN project. We display renderings from SBGN-ED and PathVisio-SBGN next to the display of my SBML Layout library. The application is interactive, such that you can upload SBGN files or post directories containing SBGN files. Project: SBGN-ML Render Comparison |
Further online resources are still on sys-bio.org but will be migrated soon. There you have:
You might also want to take a look at the SBML Online Validator.